Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911749.1_cds_XP_016461776.1_55066
CDS Infomation

[gene=LOC107785065] [db_xref=GeneID:107785065] [protein=D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like] [protein_id=XP_016461776.1] [location=complement(join(8993..9664,9956..10051,10132..10242,10438..10814,11470..12013))] [gbkey=CDS]
Sequence

ATGGCGGCATCTGCTTCTTCGACTTTAAATTTCTCCACCAAACCCTCCCACACCTCTCTC
TCATGGAAAACACGCATCGGTTCCTCCTCCGTTTTCGCCGTCGCCGCCTTGTCTCCCCGC
CGCGATCAGCGTCAGTACCCACGTTTCGTTATATTCTCCATGGGCGCAAAACCTACGGTC
CTTGTAGCTGAAAAACTCGGCGAGGCAGGAGTAGATCTCCTAAAGGAATTCGCTGACGTG
GATTGTTCGTATAACCTGAGTCCCGAGGAACTCCGCAATAAGATCTCATTGTGTGATGCG
TTGATTGTACGGAGTGGTACGAAGGTGAGCCGTGAGGTATTTGAGTCGTCCGGTGGACGG
CTTAAAGTTGTTGGACGAGCTGGTGTGGGAATTGATAATGTGGATCTTGCAGCGGCAACT
GAGCATGGATGCCTTGTTGTTAATGCGCCCACTGCTAACACTGTTGCTGCTGCGGAGCAT
GGAATCGCATTACTCACCGCTATGGCTCGAAATATTGCTCAAGCCGATGCTTCCGTGAAA
GCTGGAAAGTGGCTGAGAAACAAATATGTTGGTGTCTCCCTAGTTGGCAAAACACTTGCT
GTGATGGGTTTTGGGAAGGTTGGATCAGAAGTTGCCAGGCGAGCTAAGGGGCTTGGCATG
CATGTTATTGCTCATGATCCATATGCCCCTGCTGACCGTGCACGTGCCATTGGGGTGGAG
CTTGTTAGCTTTGATGAAGCCATTGCGTCTGCAGATTTTATCTCACTTCACATGCCACTT
ACATCTGCAACTAAGAAGGTCCTAAATGATGAAACTTTCGCAAAGATGAAAAAGGGTGTG
CGAATTGTCAATGTTGCTCGTGGGGGAGTGATTGATGAAGATGCTTTGGTCAGGGCACTT
GATGCTGGAATTGTGGCACAGGCAGCACTTGATGTCTTCACTGTGGAGCCACCATCAAAG
GATAGTAAGTTGATTCAACATGAGAATGTAACTGCAACGCCTCATCTTGGCGCTAGTACT
ATGGAAGCGCAGGAAGGGGTGGCCATTGAGATAGCAGAAGCTGTTGTTGGAGCTTTGAAA
GGAGAGCTTGCTGCTACTGCTGTCAATGCTCCAATGGTGCCTGCTGAGGTGCTCTCCGAG
CTGAAGCCTTTTGTCGAACTGGCTGAAAAACTTGGTAGACTTGCTGTCCAACTAGTCGCA
GGTGGAAGTGGTGTGAAATCAGTGAAAGTGACGTATGGTTCAGCTAGAGCACCTGATGAT
CTTGACACAAGATTGCTTCGTGCCATGATAACTAAGGGATTGATTGAGCCTATTTCCAGT
GCCTTTGTGAACTTGGTCAATGCAGATTTCACTGCTAAACAGAGAGGACTAAGAATAGCT
GAAGAAAGATCTCTTCTAAATGGTTCACCAGAAAGTCCACTCGAGTTCATTCGGGTTCAG
ATTGCCAATGTGGAGTCCAAGTTTGCAAGTGCTGTTTCTGATTCTGGAGAGATTAGAGTG
GAGGGCAGGGTAAAAGATGGAATCCCTCATTTGACAAAAGTTGGATCTTTTGAAGTGGAT
GTGAGCTTGGAAGGCAGCATCATTCTCTGTAGACAGGTTGATCAGCCAGGAATGATCGGG
AAGGTGGGTAGCATCTTGTCTGAGGAGAATGTGAATGTAAGTTTCATGAGTGTTGGAAGG
GTTGCTCCAAGGAAGCACGCGGTTATGGCTATTGGAGTGGATGAGCAACCAAGCAAGGAG
TCATTGAAGAGGATTGGGGAAATTCCTGCTGTTGAGGAGTTTGTTTACCTTAAATTATAA

Peptide Sequence

PEP ID

XP_016461776.1
PEP Infomation

PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MAASASSTLNFSTKPSHTSLSWKTRIGSSSVFAVAALSPRRDQRQYPRFVIFSMGAKPTV
LVAEKLGEAGVDLLKEFADVDCSYNLSPEELRNKISLCDALIVRSGTKVSREVFESSGGR
LKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASVK
AGKWLRNKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVE
LVSFDEAIASADFISLHMPLTSATKKVLNDETFAKMKKGVRIVNVARGGVIDEDALVRAL
DAGIVAQAALDVFTVEPPSKDSKLIQHENVTATPHLGASTMEAQEGVAIEIAEAVVGALK
GELAATAVNAPMVPAEVLSELKPFVELAEKLGRLAVQLVAGGSGVKSVKVTYGSARAPDD
LDTRLLRAMITKGLIEPISSAFVNLVNADFTAKQRGLRIAEERSLLNGSPESPLEFIRVQ
IANVESKFASAVSDSGEIRVEGRVKDGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIG
KVGSILSEENVNVSFMSVGRVAPRKHAVMAIGVDEQPSKESLKRIGEIPAVEEFVYLKL

Transcript Sequence

Gene sequence data has not been registered.